Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903488.1_cds_XP_016453568.1_47679
CDS Infomation

[gene=LOC107777913] [db_xref=GeneID:107777913] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016453568.1] [location=join(22809..23693,24381..25001)] [gbkey=CDS]
Sequence

ATGCAGTACTTCAACTTCTTTTCCCTTTTCCTTTTTGTGTCTTTCCTCTTTTTATTAAGG
AAATGGAAGAATTCCAATAGCCATACCAAAAGATTGCCTCCAGGTCCATGGAAATTACCT
TTACTTGGAAACATGTTTCATTTGCTAGGTGGACCTCCACATCATGTCCTTGGAGATTTA
GCCAAAAAATATGGTCCACTTATGCACCTTCAACTAGGTGAAGTTTCTGTAGTTGCTGTT
ACTTCTCCTGAGATGGCGAAAGAAGTACTAAAAACTCATGACCTCGCTTTTGCATCTCGG
CCTTTACTTTTAGCTGCCAAAATTGTATGCTACAACGGGACGGACATTGTCTTTTCCCCC
TATGGTGATTACTGGAGACAAATGCGTAAAATTTGTCTCTTGGAATTGCTTAGTGCCAAA
AATGTTAGGTCATTCAGTTCAGTTAGACGAGATGAAGTTTTTCGTATGATTGAATTTTTT
CGATCATCTTCTGGTAAGCCTGTTAATGTAACAAAAAGGATTTCTGTATTCACAAGCTCT
ATGACATGTAGATCAGCCTTTGGACAAGAATACAAGGAGCAAGACGAATTTGCACGACTA
GTAAAAAAAGTGTCAAGCTTAATGGAAGGGTTCGATATTGCTGATATATTTCCTTCATTG
AAGTTTCTTCATGTGCTCAGTGGGATGAAAGCTAAAGTTATGGATGCACACCATGAGTTA
GATGCCATTCTTGAAAAAATTATCAATGAGCACAAGAAAATTGCAACTGGAAAGAATAAT
GATGAATTAGGAGGTGAAGGTTTAATTGACGTACTGCTAAGACTAATGAAAGAGGGAGGC
CTTCAGTTCCCAATCACCAACGACAACATCAAAGCTATTATTTTTGACATGTTTGGTGCG
GGCACAGAAACTTCATCAACCACAATTGATTGGGCCATGGTCGAAATGATGAAGAATCCA
ACTGTATTCGCTAAAGCTCAAGCAGAGGTAAGAAAAGCCTTCAGAGGAAAAGAAACTTTT
GATGAAAATGATGTCGAGGAGTTGAAATACCTAAAATTAGTCATCAAAGAAACTTTTAGA
CTCCATCCTCCGTTTCCCCTTTTGCTCCCAAGAGAATCAAGAGAAGAAACAGACATAAAC
GGCTACACTATTTCATTGAAAACAAAACTTATGGTTAACGTTTGGGCTATTGGAAGAGAT
CCAAAATATTGGGATGATGTCGAAAGCTTTAAGCCAGAGAGATTTGAACACAACTCTATG
GATTTTATTGGTAATAATTTTGAATATCTTCCATTTGGTAGTGGAAGAAGAATGTGTCCT
GGGATATCATTTGGTTTGGCTAATGTTTATTTGCCACTAGCTCAATTGTTATATCATTTT
GATTGGAAACTCCCTACTGGAATCAATCCATGTGACTTGGACATGATTGAGTCGTCAGGA
GCAACTTGTTCTAGAAAGAGTGATTTATACTTGACTGCTACTCCATATCAACCTTCTCAA
AAGTGA

Peptide Sequence

PEP ID

XP_016453568.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MQYFNFFSLFLFVSFLFLLRKWKNSNSHTKRLPPGPWKLPLLGNMFHLLGGPPHHVLGDL
AKKYGPLMHLQLGEVSVVAVTSPEMAKEVLKTHDLAFASRPLLLAAKIVCYNGTDIVFSP
YGDYWRQMRKICLLELLSAKNVRSFSSVRRDEVFRMIEFFRSSSGKPVNVTKRISVFTSS
MTCRSAFGQEYKEQDEFARLVKKVSSLMEGFDIADIFPSLKFLHVLSGMKAKVMDAHHEL
DAILEKIINEHKKIATGKNNDELGGEGLIDVLLRLMKEGGLQFPITNDNIKAIIFDMFGA
GTETSSTTIDWAMVEMMKNPTVFAKAQAEVRKAFRGKETFDENDVEELKYLKLVIKETFR
LHPPFPLLLPRESREETDINGYTISLKTKLMVNVWAIGRDPKYWDDVESFKPERFEHNSM
DFIGNNFEYLPFGSGRRMCPGISFGLANVYLPLAQLLYHFDWKLPTGINPCDLDMIESSG
ATCSRKSDLYLTATPYQPSQK

Transcript Sequence

Gene sequence data has not been registered.